Architectural Design Record

25-09-2018 handling_chr_header branch merge with master

This rmap_tool.py from this branch take the chromosome format from the used the reference genome and output a file with two columns, dictionary like with number of the chromosome and the name of the chromsome from the reference genome. example 1 chr1 2 chr2 3 chr3 ect…

This file is passed to the makeBaitmap.py script and generate the .batimap file with the corresponding chromsome name. This is necesary as the rtrees used in makeBaitmap.py needs an integer instead of “chr” or any other format.

15-10-2018 mm_mods_for_makebaitmaps branch merge with master

This branch contains some modifications from Mark to solve issues with pyCOMPSs regarding makeBaitmap.py tool